Skip directly to search Skip directly to A to Z list Skip directly to page options Skip directly to site content
Formulas related to IRMA configuration

Formulas related to IRMA configuration paramters, in particular, MIN_F, MIN_CONF, and AUTO_F.


Return to the IRMA homepage


For any fixed site:

coverage-depth-formula


Expected error is used for the allele-specific confidence interval:

expected-error-formula



We define confidence as:

confidence-formula


Adding the position subscript p, the automatic frequency heuristic (enabled by AUTO_F) is found:

auto-f-formula



Return to the Influenza Division Bioinformatics Team homepage
This page last reviewed: Friday, November 04, 2016
TOP